Uses of Class
fr.igred.omero.exception.OMEROServerError
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Packages that use OMEROServerError Package Description fr.igred.omero fr.igred.omero.annotations fr.igred.omero.exception fr.igred.omero.repository fr.igred.omero.roi -
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Uses of OMEROServerError in fr.igred.omero
Methods in fr.igred.omero that throw OMEROServerError Modifier and Type Method Description void
Client. delete(TableWrapper table)
Deletes a table from OMEROvoid
Client. delete(GenericObjectWrapper<?> object)
Deletes an object from OMERO.void
Client. deleteFile(Long id)
Deletes a file from OMEROList<IObject>
Client. findByQuery(String query)
Finds objects on OMERO through a database query.List<DatasetWrapper>
Client. getDatasets()
Gets all the datasets available from OMERO.List<ImageWrapper>
Client. getImagesTagged(TagAnnotationWrapper tag)
Gets all images tagged with a specified tag from OMERO.List<ImageWrapper>
Client. getImagesTagged(Long tagId)
Gets all images tagged with a specified tag from OMERO.TagAnnotationWrapper
Client. getTag(Long id)
Gets a specific tag from the OMERO databaseList<TagAnnotationWrapper>
Client. getTags()
Gets the list of TagAnnotationWrapper available to the userList<TagAnnotationWrapper>
Client. getTags(String name)
Gets the list of TagAnnotationWrapper with the specified name available to the user -
Uses of OMEROServerError in fr.igred.omero.annotations
Methods in fr.igred.omero.annotations that throw OMEROServerError Modifier and Type Method Description List<DatasetWrapper>
TagAnnotationWrapper. getDatasets(Client client)
Gets all datasets with this tag from OMERO.List<ImageWrapper>
TagAnnotationWrapper. getImages(Client client)
Gets all images with this tag from OMERO.List<ProjectWrapper>
TagAnnotationWrapper. getProjects(Client client)
Gets all projects with this tag from OMERO. -
Uses of OMEROServerError in fr.igred.omero.exception
Methods in fr.igred.omero.exception that throw OMEROServerError Modifier and Type Method Description static void
ExceptionHandler. handleException(Throwable t, String message)
Helper method to convert an exception from: DSAccessException to AccessException DSOutOfServiceException to ServiceException ServerError to OMEROServerErrorstatic void
ExceptionHandler. handleServiceOrServer(Throwable t, String message)
Helper method to convert an exception from: DSOutOfServiceException to ServiceException ServerError to OMEROServerError -
Uses of OMEROServerError in fr.igred.omero.repository
Methods in fr.igred.omero.repository that throw OMEROServerError Modifier and Type Method Description List<File>
ImageWrapper. download(Client client, String path)
Downloads the original files from the server.FolderWrapper
ImageWrapper. getFolder(Client client, Long folderId)
Gets the folder with the specified id on OMERO.List<ImageWrapper>
DatasetWrapper. getImagesTagged(Client client, TagAnnotationWrapper tag)
Gets all images in the dataset tagged with a specified tag from OMERO.List<ImageWrapper>
DatasetWrapper. getImagesTagged(Client client, Long tagId)
Gets all images in the dataset tagged with a specified tag from OMERO.List<ImageWrapper>
ProjectWrapper. getImagesTagged(Client client, TagAnnotationWrapper tag)
Gets all images in the project tagged with a specified tag from OMERO.List<ImageWrapper>
ProjectWrapper. getImagesTagged(Client client, Long tagId)
Gets all images in the project tagged with a specified tag from OMERO.BufferedImage
ImageWrapper. getThumbnail(Client client, int size)
Retrieves the image thumbnail of the specified size.Constructors in fr.igred.omero.repository that throw OMEROServerError Constructor Description FolderWrapper(Client client, String name)
Constructor of the FolderWrapper class. -
Uses of OMEROServerError in fr.igred.omero.roi
Methods in fr.igred.omero.roi that throw OMEROServerError Modifier and Type Method Description void
ROIWrapper. saveROI(Client client)
Saves the ROI.
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