Uses of Class
fr.igred.omero.repository.ImageWrapper

Packages that use ImageWrapper

Package	Description
fr.igred.omero	This package contains abstract wrapper classes for the OMERO Gateway and the basic OMERO object.
fr.igred.omero.annotations	This package contains wrapper classes for annotations.
fr.igred.omero.repository	This package contains classes related to the hierarchical organization for images.
fr.igred.omero.roi	This package contains wrapper classes for OMERO shapes and ROIs.

Uses of ImageWrapper in fr.igred.omero

Methods in fr.igred.omero that return ImageWrapper

Modifier and Type	Method	Description
ImageWrapper	Client.getImage(java.lang.Long id)	Returns an ImageWrapper that contains the image with the specified id from OMERO.

Methods in fr.igred.omero that return types with arguments of type ImageWrapper

Modifier and Type	Method	Description
java.util.List<ImageWrapper>	Client.getImages()	Gets all images owned by the current user.
java.util.List<ImageWrapper>	Client.getImages(java.lang.Long... ids)	Gets the images with the specified ids from OMERO
java.util.List<ImageWrapper>	Client.getImages(java.lang.String name)	Gets all images with a certain name from OMERO.
java.util.List<ImageWrapper>	Client.getImages(java.lang.String projectName, java.lang.String datasetName, java.lang.String imageName)	Gets all images with the name specified inside projects and datasets with the given names.
java.util.List<ImageWrapper>	Client.getImagesKey(java.lang.String key)	Gets all images with a certain key
java.util.List<ImageWrapper>	Client.getImagesLike(java.lang.String motif)	Gets all images with a certain motif in their name from OMERO.
java.util.List<ImageWrapper>	Client.getImagesPairKeyValue(java.lang.String key, java.lang.String value)	Gets all images with a certain key value pair from OMERO
java.util.List<ImageWrapper>	Client.getImagesTagged(TagAnnotationWrapper tag)	Gets all images tagged with a specified tag from OMERO.
java.util.List<ImageWrapper>	Client.getImagesTagged(java.lang.Long tagId)	Gets all images tagged with a specified tag from OMERO.

Uses of ImageWrapper in fr.igred.omero.annotations

Methods in fr.igred.omero.annotations that return types with arguments of type ImageWrapper

Modifier and Type	Method	Description
java.util.List<ImageWrapper>	GenericAnnotationWrapper.getImages(Client client)	Gets all images with this tag from OMERO.

Uses of ImageWrapper in fr.igred.omero.repository

Methods in fr.igred.omero.repository that return ImageWrapper

Modifier and Type	Method	Description
ImageWrapper	WellSampleWrapper.getImage()	Returns the image related to that sample if any.

Methods in fr.igred.omero.repository that return types with arguments of type ImageWrapper

Modifier and Type	Method	Description
java.util.List<ImageWrapper>	ImageWrapper.getFilesetImages(Client client)	Returns the list of images sharing the same fileset as the current image.
java.util.List<ImageWrapper>	DatasetWrapper.getImages(Client client)	Gets all images in the dataset available from OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.getImages(Client client, java.lang.String name)	Gets all images in the dataset with a certain name from OMERO.
java.util.List<ImageWrapper>	ProjectWrapper.getImages(Client client)	Gets all images in the project available from OMERO.
java.util.List<ImageWrapper>	ProjectWrapper.getImages(Client client, java.lang.String name)	Gets all images in the project with a certain name from OMERO.
java.util.List<ImageWrapper>	ProjectWrapper.getImages(Client client, java.lang.String datasetName, java.lang.String imageName)	Gets all images with a certain name from datasets with the specified name inside this project on OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.getImagesKey(Client client, java.lang.String key)	Gets all images in the dataset with a certain key
java.util.List<ImageWrapper>	ProjectWrapper.getImagesKey(Client client, java.lang.String key)	Gets all images in the project with a certain key
java.util.List<ImageWrapper>	DatasetWrapper.getImagesLike(Client client, java.lang.String motif)	Gets all images in the dataset with a certain motif in their name from OMERO.
java.util.List<ImageWrapper>	ProjectWrapper.getImagesLike(Client client, java.lang.String motif)	Gets all images in the project with a certain motif in their name from OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.getImagesPairKeyValue(Client client, java.lang.String key, java.lang.String value)	Gets all images in the dataset with a certain key value pair from OMERO
java.util.List<ImageWrapper>	ProjectWrapper.getImagesPairKeyValue(Client client, java.lang.String key, java.lang.String value)	Gets all images in the project with a certain key value pair from OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.getImagesTagged(Client client, TagAnnotationWrapper tag)	Gets all images in the dataset tagged with a specified tag from OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.getImagesTagged(Client client, java.lang.Long tagId)	Gets all images in the dataset tagged with a specified tag from OMERO.
java.util.List<ImageWrapper>	ProjectWrapper.getImagesTagged(Client client, TagAnnotationWrapper tag)	Gets all images in the project tagged with a specified tag from OMERO.
java.util.List<ImageWrapper>	ProjectWrapper.getImagesTagged(Client client, java.lang.Long tagId)	Gets all images in the project tagged with a specified tag from OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.replaceImages(Client client, java.util.Collection<? extends ImageWrapper> oldImages, ImageWrapper newImage)	Replaces (and unlinks) a collection of images from this dataset by a new image, after copying their annotations and ROIs, and concatenating the descriptions (on new lines).

Methods in fr.igred.omero.repository with parameters of type ImageWrapper

Modifier and Type	Method	Description
void	DatasetWrapper.addImage(Client client, ImageWrapper image)	Adds a single image to the dataset in OMERO
void	DatasetWrapper.removeImage(Client client, ImageWrapper image)	Removes an image from the dataset in OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.replaceImages(Client client, java.util.Collection<? extends ImageWrapper> oldImages, ImageWrapper newImage)	Replaces (and unlinks) a collection of images from this dataset by a new image, after copying their annotations and ROIs, and concatenating the descriptions (on new lines).
void	FolderWrapper.setImage(ImageWrapper image)	Sets the image associated to the folder
void	WellSampleWrapper.setImage(ImageWrapper image)	Sets the image linked to this well sample.

Method parameters in fr.igred.omero.repository with type arguments of type ImageWrapper

Modifier and Type	Method	Description
void	DatasetWrapper.addImages(Client client, java.util.List<? extends ImageWrapper> images)	Adds a list of image to the dataset in OMERO.
java.util.List<ImageWrapper>	DatasetWrapper.replaceImages(Client client, java.util.Collection<? extends ImageWrapper> oldImages, ImageWrapper newImage)	Replaces (and unlinks) a collection of images from this dataset by a new image, after copying their annotations and ROIs, and concatenating the descriptions (on new lines).

Uses of ImageWrapper in fr.igred.omero.roi

Methods in fr.igred.omero.roi with parameters of type ImageWrapper

Modifier and Type	Method	Description
void	ROIWrapper.setImage(ImageWrapper image)	Sets the image linked to the ROI.