Package fr.igred.omero.roi
Class GenericShapeWrapper<T extends ShapeData>
- java.lang.Object
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- fr.igred.omero.GenericObjectWrapper<T>
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- fr.igred.omero.roi.GenericShapeWrapper<T>
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- Type Parameters:
T
- Subclass ofShapeData
- Direct Known Subclasses:
EllipseWrapper
,LineWrapper
,MaskWrapper
,PointWrapper
,PolygonWrapper
,PolylineWrapper
,RectangleWrapper
,ShapeWrapper
,TextWrapper
public abstract class GenericShapeWrapper<T extends ShapeData> extends GenericObjectWrapper<T>
Generic class containing a ShapeData (or a subclass) object.
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Nested Class Summary
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Nested classes/interfaces inherited from class fr.igred.omero.GenericObjectWrapper
GenericObjectWrapper.SortById<U extends GenericObjectWrapper<?>>
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Field Summary
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Fields inherited from class fr.igred.omero.GenericObjectWrapper
data
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Constructor Summary
Constructors Modifier Constructor Description protected
GenericShapeWrapper(T shape)
Constructor of the GenericShapeWrapper class using a ShapeData.
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Method Summary
All Methods Instance Methods Abstract Methods Concrete Methods Modifier and Type Method Description T
asShapeData()
Gets the ShapeData object contained.Shape
createTransformedAWTShape()
Returns a newShape
defined by the geometry of the specified Shape after it has been transformed by the transform.RectangleWrapper
getBoundingBox()
Returns a newRectangleWrapper
corresponding to the bounding box of the shape, once the relatedAffineTransform
has been applied.int
getC()
Gets the channel.double
getFontSize()
Gets ShapeData font sizeColor
getStroke()
Sets ShapeData stroke colorint
getT()
Sets the time-point.abstract String
getText()
Gets the text on the ShapeData.int
getZ()
Gets the z-section.void
setC(int c)
Sets the channel.void
setCZT(int c, int z, int t)
Sets the channel, z-section and time-point at once.void
setFontSize(double value)
Sets ShapeData font sizevoid
setStroke(Color color)
Sets ShapeData stroke colorvoid
setT(int t)
Sets the time-point.abstract void
setText(String text)
Sets the text on the ShapeData.void
setTransform(double a00, double a10, double a01, double a11, double a02, double a12)
Sets the transform to the matrix specified by the 6 double precision values.void
setTransform(AffineTransform transform)
Sets the transform from aAffineTransform
.void
setZ(int z)
Sets the z-section.abstract Shape
toAWTShape()
Converts the shape to anShape
.AffineTransform
toAWTTransform()
ConvertsAffineTransform
toAffineTransform
.Roi
toImageJ()
Converts shape to ImageJ ROI.-
Methods inherited from class fr.igred.omero.GenericObjectWrapper
getCreated, getGroupId, getId, getOwner, saveAndUpdate, toString
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Constructor Detail
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GenericShapeWrapper
protected GenericShapeWrapper(T shape)
Constructor of the GenericShapeWrapper class using a ShapeData.- Parameters:
shape
- the shape
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Method Detail
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asShapeData
public T asShapeData()
Gets the ShapeData object contained.- Returns:
- the shape.
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getC
public int getC()
Gets the channel.- Returns:
- the channel. -1 if the shape applies to all channels of the image.
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setC
public void setC(int c)
Sets the channel.- Parameters:
c
- the channel. Pass -1 to remove z value, i. e. shape applies to all channels of the image.
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getZ
public int getZ()
Gets the z-section.- Returns:
- the z-section. -1 if the shape applies to all z-sections of the image.
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setZ
public void setZ(int z)
Sets the z-section.- Parameters:
z
- the z-section. Pass -1 to remove z value, i. e. shape applies to all z-sections of the image.
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getT
public int getT()
Sets the time-point.- Returns:
- the time-point. -1 if the shape applies to all time-points of the image.
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setT
public void setT(int t)
Sets the time-point.- Parameters:
t
- the time-point. Pass -1 to remove t value, i. e. shape applies to all time-points of the image.
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setCZT
public void setCZT(int c, int z, int t)
Sets the channel, z-section and time-point at once.- Parameters:
c
- the channel. Pass -1 to remove z value, i. e. shape applies to all channels of the image.z
- the z-section. Pass -1 to remove z value, i. e. shape applies to all z-sections of the image.t
- the time-point. Pass -1 to remove t value, i. e. shape applies to all time-points of the image.
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getFontSize
public double getFontSize()
Gets ShapeData font size- Returns:
- The font size (in typography points)
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setFontSize
public void setFontSize(double value)
Sets ShapeData font size- Parameters:
value
- The font size (in typography points)
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getStroke
public Color getStroke()
Sets ShapeData stroke color- Returns:
- The stroke color
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setStroke
public void setStroke(Color color)
Sets ShapeData stroke color- Parameters:
color
- The stroke color
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getText
public abstract String getText()
Gets the text on the ShapeData.- Returns:
- the text
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setText
public abstract void setText(String text)
Sets the text on the ShapeData.- Parameters:
text
- the text
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toAWTShape
public abstract Shape toAWTShape()
Converts the shape to anShape
.- Returns:
- The converted AWT Shape.
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setTransform
public void setTransform(double a00, double a10, double a01, double a11, double a02, double a12)
Sets the transform to the matrix specified by the 6 double precision values.- Parameters:
a00
- the X coordinate scaling element of the 3x3 matrixa10
- the Y coordinate shearing element of the 3x3 matrixa01
- the X coordinate shearing element of the 3x3 matrixa11
- the Y coordinate scaling element of the 3x3 matrixa02
- the X coordinate translation element of the 3x3 matrixa12
- the Y coordinate translation element of the 3x3 matrix
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setTransform
public void setTransform(AffineTransform transform)
Sets the transform from aAffineTransform
.- Parameters:
transform
- A Java AffineTransform.
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toAWTTransform
public AffineTransform toAWTTransform()
ConvertsAffineTransform
toAffineTransform
.- Returns:
- The converted affine transform.
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createTransformedAWTShape
public Shape createTransformedAWTShape()
Returns a newShape
defined by the geometry of the specified Shape after it has been transformed by the transform.- Returns:
- A new transformed
Shape
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getBoundingBox
public RectangleWrapper getBoundingBox()
Returns a newRectangleWrapper
corresponding to the bounding box of the shape, once the relatedAffineTransform
has been applied.- Returns:
- The bounding box.
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toImageJ
public Roi toImageJ()
Converts shape to ImageJ ROI.- Returns:
- An ImageJ ROI.
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