Uses of Interface
fr.igred.omero.client.ConnectionHandler

Packages that use ConnectionHandler

Package	Description
fr.igred.omero	This package contains the main interfaces and abstract classes to handle OME Remote Objects.
fr.igred.omero.annotations	This package contains interfaces and classes for handling annotations.
fr.igred.omero.client	This package contains the client interfaces used to interact with an OMERO server and a class implementing them.
fr.igred.omero.core	This package contains interfaces and classes to handle images and their content, such as pixels, channels or planes.

Uses of ConnectionHandler in fr.igred.omero

Methods in fr.igred.omero with parameters of type ConnectionHandler

Modifier and Type	Method	Description
protected static java.util.List<java.lang.Long>	RepositoryObjectWrapper.importImage(ConnectionHandler client, DataObject target, java.lang.String path)	Imports one image file to the target in OMERO.
protected static boolean	RepositoryObjectWrapper.importImages(ConnectionHandler client, DataObject target, java.lang.String... paths)	Imports all images candidates in the paths to the target in OMERO.

Uses of ConnectionHandler in fr.igred.omero.annotations

Methods in fr.igred.omero.annotations with parameters of type ConnectionHandler

Modifier and Type	Method	Description
java.io.File	FileAnnotation.getFile(ConnectionHandler client, java.lang.String path)	Returns the original file.
java.io.File	FileAnnotationWrapper.getFile(ConnectionHandler client, java.lang.String path)	Returns the original file.

Uses of ConnectionHandler in fr.igred.omero.client

Subinterfaces of ConnectionHandler in fr.igred.omero.client

Modifier and Type	Interface	Description
interface	Client	Client interface to connect to OMERO, browse through all the data accessible to the user and modify it.

Classes in fr.igred.omero.client that implement ConnectionHandler

Modifier and Type	Class	Description
class	GatewayWrapper	Allows the user to connect to OMERO and browse through all the data accessible to the user.

Methods in fr.igred.omero.client that return ConnectionHandler

Modifier and Type	Method	Description
ConnectionHandler	ConnectionHandler.sudo(java.lang.String username)	Returns a ConnectionHandler associated with the given username.

Uses of ConnectionHandler in fr.igred.omero.core

Methods in fr.igred.omero.core with parameters of type ConnectionHandler

Modifier and Type	Method	Description
java.util.List<java.io.File>	Image.download(ConnectionHandler client, java.lang.String path)	Downloads the original files from the server.
java.util.List<java.io.File>	ImageWrapper.download(ConnectionHandler client, java.lang.String path)	Downloads the original files from the server.
default double[][][][][]	Pixels.getAllPixels(ConnectionHandler client)	Returns an array containing the value for each voxel
double[][][][][]	Pixels.getAllPixels(ConnectionHandler client, int[] xBounds, int[] yBounds, int[] cBounds, int[] zBounds, int[] tBounds)	Returns an array containing the value for each voxel corresponding to the bounds
double[][][][][]	PixelsWrapper.getAllPixels(ConnectionHandler client, int[] xBounds, int[] yBounds, int[] cBounds, int[] zBounds, int[] tBounds)	Returns an array containing the value for each voxel corresponding to the bounds
default byte[][][][]	Pixels.getRawPixels(ConnectionHandler client, int bpp)	Returns an array containing the raw values for each voxel of each plane.
byte[][][][]	Pixels.getRawPixels(ConnectionHandler client, int[] xBounds, int[] yBounds, int[] cBounds, int[] zBounds, int[] tBounds, int bpp)	Returns an array containing the raw values for each voxel for each plane corresponding to the bounds
byte[][][][]	PixelsWrapper.getRawPixels(ConnectionHandler client, int[] xBounds, int[] yBounds, int[] cBounds, int[] zBounds, int[] tBounds, int bpp)	Returns an array containing the raw values for each voxel for each plane corresponding to the bounds
java.awt.image.BufferedImage	Image.getThumbnail(ConnectionHandler client, int size)	Retrieves the image thumbnail of the specified size.
java.awt.image.BufferedImage	ImageWrapper.getThumbnail(ConnectionHandler client, int size)	Retrieves the image thumbnail of the specified size.