fr.igred.omero.client

Interface DataManager

All Known Subinterfaces:

Client

All Known Implementing Classes:

GatewayWrapper

public interface DataManager

Interface to add or remove data on an OMERO server in a given SecurityContext.

Method Summary

Modifier and Type	Method and Description
default void	delete(Collection<? extends RemoteObject> objects) Deletes multiple objects from OMERO.
default void	delete(IObject object) Deletes an object from OMERO.
default void	delete(List<IObject> objects) Deletes multiple objects from OMERO.
default void	delete(RemoteObject object) Deletes an object from OMERO.
default void	delete(Table table) Deletes a table from OMERO.
default void	deleteFile(Long id) Deletes a file from OMERO
SecurityContext	getCtx() Returns the current SecurityContext.
DataManagerFacility	getDMFacility() Gets the DataManagerFacility to handle/write data on OMERO.
ROIFacility	getRoiFacility() Gets the ROIFacility used to manipulate ROIs from OMERO.
TablesFacility	getTablesFacility() Gets the TablesFacility used to manipulate tables on OMERO.
default IObject	save(IObject object) Saves an object on OMERO.

Method Detail

getCtx

SecurityContext getCtx()

Returns the current SecurityContext.

Returns:

See above

getDMFacility

DataManagerFacility getDMFacility()
                           throws ExecutionException

Gets the DataManagerFacility to handle/write data on OMERO. A

Returns:

See above.

Throws:

ExecutionException - If the DataManagerFacility can't be retrieved or instantiated.

getRoiFacility

ROIFacility getRoiFacility()
                    throws ExecutionException

Gets the ROIFacility used to manipulate ROIs from OMERO.

Returns:

See above.

Throws:

ExecutionException - If the ROIFacility can't be retrieved or instantiated.

getTablesFacility

TablesFacility getTablesFacility()
                          throws ExecutionException

Gets the TablesFacility used to manipulate tables on OMERO.

Returns:

See above.

Throws:

ExecutionException - If the TablesFacility can't be retrieved or instantiated.

save

default IObject save(IObject object)
              throws ServiceException,
                     AccessException,
                     ExecutionException

Saves an object on OMERO.

Parameters:

object - The OMERO object.

Returns:

The saved OMERO object

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

delete

default void delete(IObject object)
             throws ServiceException,
                    AccessException,
                    ExecutionException,
                    InterruptedException

Deletes an object from OMERO.

Parameters:

object - The OMERO object.

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

InterruptedException - If block(long) does not return.

delete

default void delete(List<IObject> objects)
             throws ServiceException,
                    AccessException,
                    ExecutionException,
                    InterruptedException

Deletes multiple objects from OMERO.

Parameters:

objects - The OMERO objects.

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

InterruptedException - If block(long) does not return.

deleteFile

default void deleteFile(Long id)
                 throws ServiceException,
                        AccessException,
                        ExecutionException,
                        InterruptedException

Deletes a file from OMERO

Parameters:

id - ID of the file to delete.

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

InterruptedException - If block(long) does not return.

delete

default void delete(Collection<? extends RemoteObject> objects)
             throws ServiceException,
                    AccessException,
                    ExecutionException,
                    InterruptedException

Deletes multiple objects from OMERO.

Parameters:

objects - The OMERO object.

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

InterruptedException - If block(long) does not return.

delete

default void delete(RemoteObject object)
             throws ServiceException,
                    AccessException,
                    ExecutionException,
                    InterruptedException

Deletes an object from OMERO.

Make sure a folder is loaded before deleting it.

Parameters:

object - The OMERO object.

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

InterruptedException - If block(long) does not return.

delete

default void delete(Table table)
             throws ServiceException,
                    AccessException,
                    ExecutionException,
                    InterruptedException

Deletes a table from OMERO.

Parameters:

table - Table to delete.

Throws:

ServiceException - Cannot connect to OMERO.

AccessException - Cannot access data.

ExecutionException - A Facility can't be retrieved or instantiated.

IllegalArgumentException - ID not defined.

InterruptedException - If block(long) does not return.