Package | Description |
---|---|
fr.igred.omero |
This package contains the main interfaces and abstract classes to handle OME Remote Objects.
|
fr.igred.omero.containers |
This package contains interfaces and classes related to the hierarchical organization for images,
e.g. containers (projects, datasets and folders).
|
fr.igred.omero.core |
This package contains interfaces and classes to handle images and their content, such as pixels, channels or planes.
|
fr.igred.omero.screen |
This package contains interfaces and classes related to the HCS organization, such as screens, plates or wells.
|
fr.igred.omero.util |
This package contains classes to handle 5D positions and boundaries as well as a utility class to check if the
library requirements are available, and another one to convert DataObjects to Wrapper objects.
|
Modifier and Type | Class and Description |
---|---|
class |
ImportWrapper<T extends DataObject>
Generic class containing a DataObject (or a subclass) object.
|
Modifier and Type | Method and Description |
---|---|
List<RepositoryObject> |
RepositoryObject.getChildren(Browser browser)
Gets the object children.
|
List<RepositoryObject> |
RepositoryObject.getChildren(Browser browser)
Gets the object children.
|
List<RepositoryObject> |
RepositoryObject.getParents(Browser browser)
Gets the object parents.
|
List<RepositoryObject> |
RepositoryObject.getParents(Browser browser)
Gets the object parents.
|
Modifier and Type | Interface and Description |
---|---|
interface |
Dataset
Interface to handle Datasets on OMERO.
|
interface |
Folder
Interface to handle Folders on OMERO.
|
interface |
Project
Interface to handle Projects on OMERO.
|
Modifier and Type | Class and Description |
---|---|
class |
DatasetWrapper
Class containing a DatasetData object.
|
class |
FolderWrapper
Class containing a FolderData object.
|
class |
ProjectWrapper
Class containing a ProjectData object.
|
Modifier and Type | Method and Description |
---|---|
default List<RepositoryObject> |
Dataset.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Folder.getChildren(Browser browser)
Reloads the folder and gets its children (images and folders).
|
default List<RepositoryObject> |
Project.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Project.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Folder.getChildren(Browser browser)
Reloads the folder and gets its children (images and folders).
|
default List<RepositoryObject> |
Dataset.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Dataset.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Folder.getParents(Browser browser)
Reloads the folder and returns its parent as a singleton list.
|
default List<RepositoryObject> |
Project.getParents(Browser browser)
Returns an empty list as projects do not have parents.
|
default List<RepositoryObject> |
Project.getParents(Browser browser)
Returns an empty list as projects do not have parents.
|
default List<RepositoryObject> |
Folder.getParents(Browser browser)
Reloads the folder and returns its parent as a singleton list.
|
default List<RepositoryObject> |
Dataset.getParents(Browser browser)
Gets the object parents.
|
Modifier and Type | Interface and Description |
---|---|
interface |
Image
Interface to handle Images on OMERO.
|
Modifier and Type | Class and Description |
---|---|
class |
ImageWrapper
Class containing an ImageData.
|
Modifier and Type | Method and Description |
---|---|
default List<RepositoryObject> |
Image.getChildren(Browser browser)
Returns an empty list as images do not have children.
|
default List<RepositoryObject> |
Image.getChildren(Browser browser)
Returns an empty list as images do not have children.
|
default List<RepositoryObject> |
Image.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Image.getParents(Browser browser)
Gets the object parents.
|
Modifier and Type | Interface and Description |
---|---|
interface |
Plate
Interface to handle Plates on OMERO.
|
interface |
PlateAcquisition
Interface to handle Plate Acquisitions on OMERO.
|
interface |
Screen
Interface to handle Screens on OMERO.
|
interface |
Well
Interface to handle Wells on OMERO.
|
interface |
WellSample
Interface to handle Well Samples on OMERO.
|
Modifier and Type | Class and Description |
---|---|
class |
PlateAcquisitionWrapper
Class containing a PlateAcquisitionData object.
|
class |
PlateWrapper
Class containing a PlateData object.
|
class |
ScreenWrapper
Class containing a ScreenData object.
|
class |
WellSampleWrapper
Class containing a WellSampleData object.
|
class |
WellWrapper
Class containing a WellData object.
|
Modifier and Type | Method and Description |
---|---|
default List<RepositoryObject> |
Plate.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
PlateAcquisition.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Screen.getChildren(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Well.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
WellSample.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
WellSample.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Well.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Screen.getChildren(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
PlateAcquisition.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Plate.getChildren(Browser browser)
Gets the object children.
|
default List<RepositoryObject> |
Plate.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
PlateAcquisition.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Screen.getParents(Browser browser)
Returns an empty list as screens do not have parents.
|
default List<RepositoryObject> |
Well.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
WellSample.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
WellSample.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Well.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Screen.getParents(Browser browser)
Returns an empty list as screens do not have parents.
|
default List<RepositoryObject> |
PlateAcquisition.getParents(Browser browser)
Gets the object parents.
|
default List<RepositoryObject> |
Plate.getParents(Browser browser)
Gets the object parents.
|
Modifier and Type | Method and Description |
---|---|
static <T extends DataObject,U extends RepositoryObject> |
Wrapper.wrapRepositoryObject(T object)
Converts (wraps) a DataObject object to a Repository object.
|
static <T extends DataObject,U extends RepositoryObject> |
Wrapper.wrapRepositoryObject(T object)
Converts (wraps) a DataObject object to a Repository object.
|
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