Uses of Interface
fr.igred.omero.roi.ROI

Packages that use ROI

Package	Description
fr.igred.omero.containers	This package contains interfaces and classes related to the hierarchical organization for images, e.g. containers (projects, datasets and folders).
fr.igred.omero.core	This package contains interfaces and classes to handle images and their content, such as pixels, channels or planes.
fr.igred.omero.roi	This package contains wrapper classes for OMERO shapes and ROIs.

Uses of ROI in fr.igred.omero.containers

Methods in fr.igred.omero.containers that return types with arguments of type ROI

Modifier and Type	Method and Description
default List<ROI>	Folder.getROIs(DataManager dm, Image image) Gets the ROIs contained in the folder associated with the provided image.
default List<ROI>	Folder.getROIs(DataManager dm, Image image) Gets the ROIs contained in the folder associated with the provided image.
List<ROI>	Folder.getROIs(DataManager dm, long imageId) Gets the ROIs contained in the folder associated with the provided image ID.
List<ROI>	FolderWrapper.getROIs(DataManager dm, long imageId) Gets the ROIs contained in the folder associated with the provided image ID.
List<ROI>	FolderWrapper.getROIs(DataManager dm, long imageId) Gets the ROIs contained in the folder associated with the provided image ID.
List<ROI>	Folder.getROIs(DataManager dm, long imageId) Gets the ROIs contained in the folder associated with the provided image ID.

Methods in fr.igred.omero.containers with parameters of type ROI

Modifier and Type	Method and Description
default void	Folder.addROIs(DataManager dm, Image image, ROI... rois) Adds ROIs to the folder and associate them to the provided image.
default void	Folder.addROIs(DataManager dm, Image image, ROI... rois) Adds ROIs to the folder and associate them to the provided image.
default void	Folder.addROIs(DataManager dm, long imageId, ROI... rois) Adds ROIs to the folder and associate them to the provided image ID.
default void	Folder.addROIs(DataManager dm, long imageId, ROI... rois) Adds ROIs to the folder and associate them to the provided image ID.
default void	Folder.unlinkROIs(DataManager dm, ROI... rois) Unlink ROIs from the folder.
default void	Folder.unlinkROIs(DataManager dm, ROI... rois) Unlink ROIs from the folder.

Method parameters in fr.igred.omero.containers with type arguments of type ROI

Modifier and Type	Method and Description
default void	Folder.unlinkROIs(DataManager dm, Collection<? extends ROI> rois) Unlink ROIs from the folder.
default void	Folder.unlinkROIs(DataManager dm, Collection<? extends ROI> rois) Unlink ROIs from the folder.

Uses of ROI in fr.igred.omero.core

Methods in fr.igred.omero.core that return types with arguments of type ROI

Modifier and Type	Method and Description
List<ROI>	Image.getROIs(DataManager dm) Gets all ROIs linked to the image in OMERO
List<ROI>	ImageWrapper.getROIs(DataManager dm) Gets all ROIs linked to the image in OMERO
List<ROI>	ImageWrapper.getROIs(DataManager dm) Gets all ROIs linked to the image in OMERO
List<ROI>	Image.getROIs(DataManager dm) Gets all ROIs linked to the image in OMERO
List<ROI>	Image.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
List<ROI>	ImageWrapper.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
List<ROI>	ImageWrapper.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
List<ROI>	Image.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
default List<ROI>	Image.saveROIs(DataManager dm, ROI... rois) Links ROIs to the image in OMERO.
default List<ROI>	Image.saveROIs(DataManager dm, ROI... rois) Links ROIs to the image in OMERO.

Methods in fr.igred.omero.core with parameters of type ROI

Modifier and Type	Method and Description
default List<ROI>	Image.saveROIs(DataManager dm, ROI... rois) Links ROIs to the image in OMERO.
default List<ROI>	Image.saveROIs(DataManager dm, ROI... rois) Links ROIs to the image in OMERO.
default ij.ImagePlus	Image.toImagePlus(Client client, ROI roi) Gets the imagePlus from the image generated from the ROI.
default ij.ImagePlus	Image.toImagePlus(Client client, ROI roi) Gets the imagePlus from the image generated from the ROI.

Method parameters in fr.igred.omero.core with type arguments of type ROI

Modifier and Type	Method and Description
List<ROI>	Image.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
List<ROI>	ImageWrapper.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
List<ROI>	ImageWrapper.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.
List<ROI>	Image.saveROIs(DataManager dm, Collection<? extends ROI> rois) Links ROIs to the image in OMERO.

Uses of ROI in fr.igred.omero.roi

Classes in fr.igred.omero.roi that implement ROI

Modifier and Type	Class and Description
class	ROIWrapper Class containing a ROIData object.

Methods in fr.igred.omero.roi that return types with arguments of type ROI

Modifier and Type	Method and Description
static List<ROI>	ROIWrapper.fromImageJ(Collection<? extends Roi> ijRois) Converts a collection of ImageJ ROIs to a list of OMERO ROIs
static List<ROI>	ROIWrapper.fromImageJ(Collection<? extends Roi> ijRois) Converts a collection of ImageJ ROIs to a list of OMERO ROIs
static List<ROI>	ROIWrapper.fromImageJ(Collection<? extends Roi> ijRois, String property) Converts a collection of ImageJ ROIs to a list of OMERO ROIs
static List<ROI>	ROIWrapper.fromImageJ(Collection<? extends Roi> ijRois, String property) Converts a collection of ImageJ ROIs to a list of OMERO ROIs
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, String property, Supplier<? extends ROI> constructor, Function<? super Roi,? extends Iterable<? extends Shape>> converter) Converts a collection of ImageJ ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, String property, Supplier<? extends ROI> constructor, Function<? super Roi,? extends Iterable<? extends Shape>> converter) Converts a collection of ImageJ ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, Supplier<? extends ROI> constructor, Function<? super Roi,Iterable<? extends Shape>> converter) Converts an ImageJ list of ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, Supplier<? extends ROI> constructor, Function<? super Roi,Iterable<? extends Shape>> converter) Converts an ImageJ list of ROIs to a list of OMERO ROIs using the provided constructor and shape converter.

Method parameters in fr.igred.omero.roi with type arguments of type ROI

Modifier and Type	Method and Description
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, String property, Supplier<? extends ROI> constructor, Function<? super Roi,? extends Iterable<? extends Shape>> converter) Converts a collection of ImageJ ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, String property, Supplier<? extends ROI> constructor, Function<? super Roi,? extends Iterable<? extends Shape>> converter) Converts a collection of ImageJ ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, Supplier<? extends ROI> constructor, Function<? super Roi,Iterable<? extends Shape>> converter) Converts an ImageJ list of ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<ROI>	ROI.fromImageJ(Collection<? extends Roi> ijRois, Supplier<? extends ROI> constructor, Function<? super Roi,Iterable<? extends Shape>> converter) Converts an ImageJ list of ROIs to a list of OMERO ROIs using the provided constructor and shape converter.
static List<Roi>	ROI.toImageJ(Collection<? extends ROI> rois) Converts a collection of OMERO ROIs to a list of ImageJ ROIs.
static List<Roi>	ROI.toImageJ(Collection<? extends ROI> rois) Converts a collection of OMERO ROIs to a list of ImageJ ROIs.
static List<Roi>	ROI.toImageJ(Collection<? extends ROI> rois, String property) Converts a collection of OMERO ROIs to a list of ImageJ ROIs.
static List<Roi>	ROI.toImageJ(Collection<? extends ROI> rois, String property) Converts a collection of OMERO ROIs to a list of ImageJ ROIs.
static List<Roi>	ROI.toImageJ(Collection<? extends ROI> rois, String property, boolean groupRois) Converts a collection of OMERO ROIs to a list of ImageJ ROIs.
static List<Roi>	ROI.toImageJ(Collection<? extends ROI> rois, String property, boolean groupRois) Converts a collection of OMERO ROIs to a list of ImageJ ROIs.